Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944044.1_cds_XP_016487004.1_77792
CDS Infomation

[gene=LOC107807185] [db_xref=GeneID:107807185] [protein=factor of DNA methylation 1-like] [protein_id=XP_016487004.1] [location=complement(join(83321..83548,84123..84341,84488..84658,84902..85083,85458..86349))] [gbkey=CDS]
Sequence

ATGAGCAGCTCAGATGAGGAATCAGATTTCAGTGATTCTGAGATTAATGATTATATAGAG
AAACCTTATCAAGAACTGAGAACTGGAAAATACAAAGTGAAGGGTCCAAATGGGTCTCTC
AGATGCCCCTTTTGTGCTGGGAGGAAGAAGCAAGATTACAAATACAATGAACTGCTTCAA
CATGCTTCTGGTGCAGGTAAAGGTGCTCGTTTAGGTGCAAAACAAAAAGCAAACCACTTG
GCTCTTGCAAAGTACTTGGAATCTGACCTAGCTAATGAGGCTGAGCCAGTACCCCCACGT
GCTGTCACACCAGAGCGCACAGAAGCTGAGCAAACAGAAGTATTTTGCTGGCCTTGGACT
GCAGTTGTTGTCAATATATCAAAAGAAACAGCAGATGGAGAATCTGTGGACGACAAGGAG
TATTGGTTGAAAAAATTTTCCTTGTATAAGCCCTTGGAAATTGTGCTTTTCCATGATAAC
CAAGCGCTGGTGTCTGAAGCTATTGTGACTTTTGATAGGAATTGGACTGGTTTCAATAAT
GCAATGGAATTTGAGAAATCCTTTGAAGCCAGGCGCTGCAGTAAAAAAGAATGGTGTGCC
CATAAAAGTTGCCCCAGTTCAAATATTTATGGATGGGTTACTCGGGAAGATGATTTTAGA
GCAGAAGGGGCAATAGGAGAATATCTCCGTGGAAAGGGGGAGTTAAAGACTATATCTGAC
CTGATCAAGGAAGAAACCCAGGATAGGAATAAGGTCGTAGCTACTCTAGCTAACGAGATT
GATATGGAAAATGAAAATCTGGATGAGCTGCAGATACAGTTTAATTTAAAGACGTTGTCT
CTTAGGCAGATGCTTGAGGAGAAAGACATACTACATCGTTCTTTCTTTGAAGAAACAAGG
AAGATGCAACGCCTTGCTCGGGAGCATGTACAGAAGGTCCTACATGAGCAGGAGATGTTA
AGTGTAGAGCTGGAGAGGAAGAAGAAGCAGCTAGATATTTGGAGCAGAGAATTGAACAAA
CGTGAGACCTTAACTGAAAGAGAAAAGCAAAAGCTGGATGAGGAGAAGCAAAAGAATGAC
GTAAGAAACTCTNCAGCTGTGCAAAATAAAATCAAGGAGATGAACGAGGAGCTGGTTGGG
AAAATGGAAGAAATGGAAGACTTGGAATCCTTGAATCAAACCCTTCTAGCGAAGGAGCGC
AGGAGTAATGATGAGCTACAAGATGCTCGGCGCACATTAATTACGGGATTGAATGAGCTC
TTGACCAGCGGGCGCTCCCATATTGGGATAAGAAGAATGGGGGAAATCGAGTCAAAAGCT
TTTCAGAATGCATGCAAGCAAAGGTTCCCAAATGAGGAAGCTGAGATCAAGGCTTTAGAA
CTGTGTTCTCTTTGGCAGGAAAAAATAAAAGACTCTGATTGGCATCCATTTAAAACTTTC
ATGGTTGACGAGTCCAAGGCTGAGAAAGTGATCGATGAGGATGATGAAGCGCTAAAAAAG
CTCAAGGAGGAATGGGGGGATGAAATTTACAATGCGGTAACTGAAGCTCTAAAGGAGATT
GAGGAATACAATCCCAGTGGCAGATATGTGATCCCTGAGATGTGGAATTCCAAGGAACAA
AGGAAGGCCACACTAAAGGAAGCAATCAGCTTCATTTTCAAGCAATTGAAGACACATAAG
AGGAAGAGATGA

Peptide Sequence

PEP ID

XP_016487004.1
PEP Infomation

PREDICTED: factor of DNA methylation 1-like [Nicotiana tabacum]
Sequence

MSSSDEESDFSDSEINDYIEKPYQELRTGKYKVKGPNGSLRCPFCAGRKKQDYKYNELLQ
HASGAGKGARLGAKQKANHLALAKYLESDLANEAEPVPPRAVTPERTEAEQTEVFCWPWT
AVVVNISKETADGESVDDKEYWLKKFSLYKPLEIVLFHDNQALVSEAIVTFDRNWTGFNN
AMEFEKSFEARRCSKKEWCAHKSCPSSNIYGWVTREDDFRAEGAIGEYLRGKGELKTISD
LIKEETQDRNKVVATLANEIDMENENLDELQIQFNLKTLSLRQMLEEKDILHRSFFEETR
KMQRLAREHVQKVLHEQEMLSVELERKKKQLDIWSRELNKRETLTEREKQKLDEEKQKND
VRNSXAVQNKIKEMNEELVGKMEEMEDLESLNQTLLAKERRSNDELQDARRTLITGLNEL
LTSGRSHIGIRRMGEIESKAFQNACKQRFPNEEAEIKALELCSLWQEKIKDSDWHPFKTF
MVDESKAEKVIDEDDEALKKLKEEWGDEIYNAVTEALKEIEEYNPSGRYVIPEMWNSKEQ
RKATLKEAISFIFKQLKTHKRKR

Transcript Sequence

Gene sequence data has not been registered.